著者

Kazufumi Nagata Yasunori Nonoue Kazuki Matsubara Ritsuko Mizobuchi Nozomi Ono Taeko Shibaya Kaworu Ebana Eri Ogiso-Tanaka Takanari Tanabata Kazuhiko Sugimoto Fumio Taguchi-Shiobara Jun-ichi Yonemaru Yusaku Uga Atsunori Fukuda Tadamasa Ueda Shin-ichi Yamamoto Utako Yamanouchi Toshiyuki Takai Takashi Ikka Katsuhiko Kondo Tomoki Hoshino Eiji Yamamoto Shunsuke Adachi Jian Sun Noriyuki Kuya Yuka Kitomi Ken Iijima Hideki Nagasaki Ayahiko Shomura Tatsumi Mizubayashi Noriyuki Kitazawa Kiyosumi Hori Tsuyu Ando Toshio Yamamoto Shuichi Fukuoka Masahiro Yano

出版者

Japanese Society of Breeding

雑誌

Breeding Science (ISSN:13447610)

巻号頁・発行日

vol.73, no.3, pp.332-342, 2023 (Released:2023-07-27)

参考文献数

64

被引用文献数

1

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Many agronomic traits that are important in rice breeding are controlled by multiple genes. The extensive time and effort devoted so far to identifying and selecting such genes are still not enough to target multiple agronomic traits in practical breeding in Japan because of a lack of suitable plant materials in which to efficiently detect and validate beneficial alleles from diverse genetic resources. To facilitate the comprehensive analysis of genetic variation in agronomic traits among Asian cultivated rice, we developed 12 sets of chromosome segment substitution lines (CSSLs) with the japonica background, 11 of them in the same genetic background, using donors representing the genetic diversity of Asian cultivated rice. Using these materials, we overviewed the chromosomal locations of 1079 putative QTLs for seven agronomic traits and their allelic distribution in Asian cultivated rice through multiple linear regression analysis. The CSSLs will allow the effects of putative QTLs in the highly homogeneous japonica background to be validated.

著者

Kenji Fujino Utako Yamanouchi

出版者

Japanese Society of Breeding

雑誌

Breeding Science (ISSN:13447610)

巻号頁・発行日

pp.19112, (Released:2020-06-05)

被引用文献数

6

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The optimization of flowering time is a key aspect in maximizing grain productivity in rice. Allelic variations in genes for flowering time are major drivers in the wide adaptability of cultivated rice around the world. Here, we identified a novel allele of flowering time gene Grain number, plant height and heading date 7 (Ghd7). Loss-of-function ghd7, Ghd7-0a, is important for extremely early flowering time for adaptability to cultivation in Hokkaido, Japan. However, the rice variety Sorachi lacks a key functional nucleotide polymorphism of Ghd7, which results in a loss of function of the gene. Based on the sequence of Ghd7 allele in Sorachi, we identified the insertion of a transposon-like sequence at an upstream site of Ghd7. Segregation analysis using an F2 population derived from the cross between Hoshinoyume and Sorachi demonstrated that the Ghd7 locus contributed to extremely early flowering time in Sorachi. This Ghd7 allele in Sorachi showed a weak function in terms of delay of flowering time, compared with loss-of-function allele, and a distinct distribution in northern Japan.